Did you refer to the links below:
http://blogs.technet.com/b/jeff_stokes/archive/2008/11/25/how-to-get-rid-of-9646-events.aspx
https://support.microsoft.com/kb/2742012
http://blogs.msdn.com/b/dvespa/archive/2014/01/06/9646-on-exchange-2013-view-information-store-status.aspx